{"id":4148,"date":"2023-03-09T15:08:59","date_gmt":"2023-03-09T07:08:59","guid":{"rendered":"https:\/\/medicine.nus.edu.sg\/bch\/?page_id=4148"},"modified":"2026-01-30T14:10:50","modified_gmt":"2026-01-30T06:10:50","slug":"phm5003","status":"publish","type":"page","link":"https:\/\/medicine.nus.edu.sg\/bch\/phm5003\/","title":{"rendered":"PHM5003 &#8211; Big Data Statistical Analysis for Precision Medicine"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-page\" data-elementor-id=\"4148\" class=\"elementor elementor-4148\" data-elementor-post-type=\"page\">\n\t\t\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-1a7af21 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"1a7af21\" data-element_type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-1f1c220\" data-id=\"1f1c220\" data-element_type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-946348f elementor-widget elementor-widget-spacer\" data-id=\"946348f\" data-element_type=\"widget\" data-widget_type=\"spacer.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-spacer\">\n\t\t\t<div class=\"elementor-spacer-inner\"><\/div>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-6d4c434 elementor-widget elementor-widget-heading\" data-id=\"6d4c434\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Course Overview<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-43faf36 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"43faf36\" data-element_type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-85384c6\" data-id=\"85384c6\" data-element_type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-f96a0ef elementor-widget elementor-widget-text-editor\" data-id=\"f96a0ef\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><span lang=\"EN-GB\" style=\"font-size: 14pt; color: #000000;\">Precision medicine leverages on insights derived from the analysis of high-throughput datasets containing multiple parameters. This module aims to provide foundational knowledge and skills for students to apply appropriate statistical approaches in evaluating and analysing high-throughput datasets in precision medicine. Students will develop the skills in designing experiments based on the statistical principles, evaluating data quality, analysing and interpreting high throughput data for precision medicine.<\/span><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-8bc5c98 elementor-widget elementor-widget-spacer\" data-id=\"8bc5c98\" data-element_type=\"widget\" data-widget_type=\"spacer.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-spacer\">\n\t\t\t<div class=\"elementor-spacer-inner\"><\/div>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-89981aa elementor-widget elementor-widget-heading\" data-id=\"89981aa\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Learning Outcomes<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-ded01ca elementor-widget elementor-widget-text-editor\" data-id=\"ded01ca\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><span lang=\"EN-SG\" style=\"font-size: 14pt; color: #000000;\">At the end of this course, students will be able to<\/span><\/p><ul style=\"list-style-type: disc;\"><li><span style=\"font-size: 14pt; color: #000000;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Explain principles of statistical modelling of data for precision medicine<\/span><\/span><\/li><li><span style=\"font-size: 14pt; color: #000000;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Explain the challenges of analyzing high throughput datasets for precision medicine<\/span><\/span><\/li><li><span style=\"font-size: 14pt; color: #000000;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Design high throughput experiments in precision medicine to minimize confounders and increase statistical power to detect differences<\/span><\/span><\/li><li><span style=\"font-size: 14pt; color: #000000;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Evaluate data quality (batch effects, missing data, noise) and perform preprocessing where appropriate (batch correction, imputation, normalization)<\/span><\/span><\/li><li><span style=\"font-size: 14pt; color: #000000;\">Analyze high throughput data to find and evaluate differences in samples using appropriate statistical tools<\/span><\/li><\/ul>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-4c49a3c elementor-widget elementor-widget-spacer\" data-id=\"4c49a3c\" data-element_type=\"widget\" data-widget_type=\"spacer.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-spacer\">\n\t\t\t<div class=\"elementor-spacer-inner\"><\/div>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-1797eb7 elementor-widget elementor-widget-heading\" data-id=\"1797eb7\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Course Outline<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-9a0e2f5 elementor-widget elementor-widget-text-editor\" data-id=\"9a0e2f5\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<ul style=\"list-style-type: disc;\"><li><span style=\"color: #000000;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\" style=\"font-size: 14pt;\">Overview of R\/Bioconductor<\/span><\/span><\/li><li><span style=\"color: #000000; font-size: 14pt;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Overview of basic statistics<\/span><\/span><\/li><li><span style=\"color: #000000; font-size: 14pt;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Challenges with datasets in precision medicine<\/span><\/span><\/li><li><span style=\"color: #000000; font-size: 14pt;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Statistical principles for high throughput data in precision medicine<\/span><\/span><\/li><li><span style=\"color: #000000; font-size: 14pt;\"><span lang=\"EN-SG\"> <\/span><span lang=\"EN-SG\">Case studies of analysis in precision medicine<\/span><\/span><ul><\/ul><\/li><\/ul>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-4ffbe37 elementor-widget elementor-widget-spacer\" data-id=\"4ffbe37\" data-element_type=\"widget\" data-widget_type=\"spacer.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-spacer\">\n\t\t\t<div class=\"elementor-spacer-inner\"><\/div>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-54b6f3d elementor-widget elementor-widget-heading\" data-id=\"54b6f3d\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Course Requirements<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-587fb2e elementor-widget elementor-widget-text-editor\" data-id=\"587fb2e\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><span style=\"font-family: tahoma, arial, helvetica, sans-serif; font-size: 14pt; color: #000000;\">Basic knowledge of R programming language<\/span><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-bdf22c5 elementor-widget elementor-widget-spacer\" data-id=\"bdf22c5\" data-element_type=\"widget\" data-widget_type=\"spacer.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-spacer\">\n\t\t\t<div class=\"elementor-spacer-inner\"><\/div>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-b49c198 elementor-widget elementor-widget-heading\" data-id=\"b49c198\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Course Coordinators<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<section class=\"elementor-section elementor-inner-section elementor-element elementor-element-2794ccc elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"2794ccc\" data-element_type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-50 elementor-inner-column elementor-element elementor-element-beec95b\" data-id=\"beec95b\" data-element_type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-7dad186 elementor-cta--layout-image-left elementor-cta--skin-classic elementor-animated-content elementor-widget elementor-widget-call-to-action\" data-id=\"7dad186\" data-element_type=\"widget\" data-widget_type=\"call-to-action.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<a class=\"elementor-cta\" href=\"https:\/\/medicine.nus.edu.sg\/bch\/faculty\/ban-hon-kim-kenneth\/\" target=\"_blank\">\n\t\t\t\t\t<div class=\"elementor-cta__bg-wrapper\">\n\t\t\t\t<div class=\"elementor-cta__bg elementor-bg\" style=\"background-image: url(https:\/\/medicine.nus.edu.sg\/bch\/wp-content\/uploads\/sites\/13\/2020\/01\/team-1-1.jpg);\" role=\"img\" aria-label=\"team-1\"><\/div>\n\t\t\t\t<div class=\"elementor-cta__bg-overlay\"><\/div>\n\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-cta__content\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h2 class=\"elementor-cta__title elementor-cta__content-item elementor-content-item\">\n\t\t\t\t\t\tDr Kenneth Ban\t\t\t\t\t<\/h2>\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<div class=\"elementor-cta__description elementor-cta__content-item elementor-content-item\">\n\t\t\t\t\t\tProgramme Director, National Supercomputing Cluster Singapore (NSCC)<br><br>Senior Lecturer, Dept of Biochemistry, NUS\t\t\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<div class=\"elementor-cta__button-wrapper elementor-cta__content-item elementor-content-item \">\n\t\t\t\t\t<span class=\"elementor-cta__button elementor-button elementor-size-\">\n\t\t\t\t\t\tProfile\t\t\t\t\t<\/span>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t<div class=\"elementor-column elementor-col-50 elementor-inner-column elementor-element elementor-element-b7d65af\" data-id=\"b7d65af\" data-element_type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-06d0084 elementor-cta--layout-image-left elementor-cta--skin-classic elementor-animated-content elementor-widget elementor-widget-call-to-action\" data-id=\"06d0084\" data-element_type=\"widget\" data-widget_type=\"call-to-action.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<a class=\"elementor-cta\" href=\"https:\/\/www.stat.nus.edu.sg\/yap-von-bing\/\" target=\"_blank\">\n\t\t\t\t\t<div class=\"elementor-cta__bg-wrapper\">\n\t\t\t\t<div class=\"elementor-cta__bg elementor-bg\" style=\"background-image: url(https:\/\/medicine.nus.edu.sg\/bch\/wp-content\/uploads\/sites\/13\/2023\/03\/YVB-2.jpg);\" role=\"img\" aria-label=\"YVB\"><\/div>\n\t\t\t\t<div class=\"elementor-cta__bg-overlay\"><\/div>\n\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-cta__content\">\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<h2 class=\"elementor-cta__title elementor-cta__content-item elementor-content-item\">\n\t\t\t\t\t\tA\/Prof Yap Von Bing\t\t\t\t\t<\/h2>\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<div class=\"elementor-cta__description elementor-cta__content-item elementor-content-item\">\n\t\t\t\t\t\tAssoc Prof, Dept of Statistics and Data Science, NUS\t\t\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<div class=\"elementor-cta__button-wrapper elementor-cta__content-item elementor-content-item \">\n\t\t\t\t\t<span class=\"elementor-cta__button elementor-button elementor-size-\">\n\t\t\t\t\t\tProfile\t\t\t\t\t<\/span>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>Course Overview Precision medicine leverages on insights derived from the analysis of high-throughput datasets containing multiple parameters. This module aims&#8230;<\/p>\n","protected":false},"author":8259,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-4148","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v26.4 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>PHM5003 - Big Data Statistical Analysis for Precision Medicine - Department of Biochemistry \u2013 School of Medicine, National University of Singapore<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/medicine.nus.edu.sg\/bch\/phm5003\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"PHM5003 - Big Data Statistical Analysis for Precision Medicine - Department of Biochemistry \u2013 School of Medicine, National University of Singapore\" \/>\n<meta property=\"og:description\" content=\"Course Overview Precision medicine leverages on insights derived from the analysis of high-throughput datasets containing multiple parameters. 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